BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007H09LP1|AL425780
(786 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1660 1545 0.0
>3x_Contig1660
Length = 13166
Score = 1545 bits (778), Expect = 0.0
Identities = 783/786 (99%)
Strand = Plus / Plus
Query: 1 ggaggatatcattttgccatcaaacgctttgaaaggwcacttaaaggctagacttaagaa 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2088 ggaggatatcattttgccatcaaacgctttgaaaggacacttaaaggctagacttaagaa 2147
Query: 61 cgcctctaagacatcggatttccgtgaagtttcagcggaagaacagcaacaactgcaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2148 cgcctctaagacatcggatttccgtgaagtttcagcggaagaacagcaacaactgcaaga 2207
Query: 121 cgagatgaatctcatcaaaaggtaccaagatatgaaggaagmagcaaaagcagagcaaag 180
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2208 cgagatgaatctcatcaaaaggtaccaagatatgaaggaagctgcaaaagcagagcaaag 2267
Query: 181 tagaaaggaagaagcagaattgaaagaaaaggaaagggaaaaggcaaaacaacaggatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2268 tagaaaggaagaagcagaattgaaagaaaaggaaagggaaaaggcaaaacaacaggatgc 2327
Query: 241 tgagaacggtgctgcaacatcttcacttaccgcaccatccatgtcgtccatatccaacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2328 tgagaacggtgctgcaacatcttcacttaccgcaccatccatgtcgtccatatccaacaa 2387
Query: 301 ttctccatctccatcgcaagtcatggatggcttttataagatcgagaagtacattaagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2388 ttctccatctccatcgcaagtcatggatggcttttataagatcgagaagtacattaagga 2447
Query: 361 tgctgagtacaccagagccattcccttgatatacgattctaacactcagagtgattttag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2448 tgctgagtacaccagagccattcccttgatatacgattctaacactcagagtgattttag 2507
Query: 421 aaaattgataaaagctccaggcaacatctctggatttagaaacaaattgaagatattgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2508 aaaattgataaaagctccaggcaacatctctggatttagaaacaaattgaagatattgtt 2567
Query: 481 cgaggactattaccaccgagtcactagtaatccacctgatcactacagatctgtctttga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2568 cgaggactattaccaccgagtcactagtaatccacctgatcactacagatctgtctttga 2627
Query: 541 aaattttattcaaagatgcaaatctgctcctttgcctcaaaccaagacacctggaagtat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2628 aaattttattcaaagatgcaaatctgctcctttgcctcaaaccaagacacctggaagtat 2687
Query: 601 gtatgaagatgaagtagtacctgttaaaccttcatcgaagtacagtggtgaaagatggaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2688 gtatgaagatgaagtagtacctgttaaaccttcatcgaagtacagtggtgaaagatggaa 2747
Query: 661 ctccaacacttccagtaaccgtccaatacctagtgaaccaagaaaggcagcttcttctcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2748 ctccaacacttccagtaaccgtccaatacctagtgaaccaagaaaggcagcttcttctcg 2807
Query: 721 ttatcaacatggtatagcctcaacaactctgccaagagcaccagccaacgcgtctaagcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2808 ttatcaacatggtatagcctcaacaactctgccaagagcaccagccaacgcgtctaagcc 2867
Query: 781 tccgga 786
||||||
Sbjct: 2868 tccgga 2873
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6373
Number of Sequences: 1807
Number of extensions: 6373
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 786
length of database: 10,358,551
effective HSP length: 16
effective length of query: 770
effective length of database: 10,329,639
effective search space: 7953822030
effective search space used: 7953822030
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)